Archive for November, 2016

DNAqua-Net: a COST-Action for developing new genetic tools for bioassessment of aquatic ecosystems in Europe

dnaqua_net-logo

From the COST-Action CA152119 websiteThe protection, preservation and restoration of aquatic ecosystems and their functions is of global importance. For European states it became legally binding mainly through the EU-Water Framework Directive (WFD). In order to assess the ecological status of a given water body, aquatic biodiversity data are obtained and compared to a reference water body. The quantified mismatch thus obtained determines the extent of potential management actions. The current approach to biodiversity assessment is based on morpho-taxonomy. This approach has many drawback such as being time consuming, limited in temporal and spatial resolution, and error-prone due to variation of individual taxonomic expertise of the analysts. Novel genomic tools can overcome many of the aforesaid problems and could complement or even replace traditional bioassessment. Yet, a plethora of approaches are independently developed in different institutions, thereby hampering any concerted routine application. The goal of this Action is to nucleate a group of researchers across disciplines with the task to identify gold-standard genomic tools and novel eco-genomic indices for routine application for biodiversity assessments of European water bodies. Furthermore, DNAqua-Net will provide a platform for training of the next generation of European researchers preparing them for the new technologies. Jointly with water managers, politicians and other stakeholders, the group will develop a conceptual framework for the standard application of eco-genomic tools as part of legally binding assessments.

The inaugural meeting of DNAqua-Net was held in the COST-building in Brussels on October 20, 2016. The COST-Action was formally accepted and chair and working group leaders were elected. So far 31 countries are associated with the action, med representatives in the Management Committee nominated by national COST-coordinators. The delegates from Norway are Trude Vrålstad (Norwegian Veterinary Institute) and Torbjørn Ekrem (NTNU University Museum). The first conference of DNAqua-Net will be held in Essen, Germany, March 6-8, 2017, with post conference meetings in the five working groups (leads in parentheses):

  • DNA Barcode References (Torbjørn Ekrem, Norge + Fédor Ciampor, Slovakia)
  • Biotic Indices & Metrics (Jan Pawlowski, Sveits + Maria Kahlert, Sverige)
  • Lab & Field Protocols (Kat Bruce, UK + Emre Keskin, Tyrkia)
  • Data Analysis & Storage (Kessy Abarenko, Estland + Diego Fontaneto, Italia)
  • Implementation Strategies & Legal Issues (Patricia Mergen, Belgia + Daniel Hering, Tyskland)

participants-dnaqua-net-meeting-brusselsParticipants at the inaugural meeting in the COST-Action DNAqua-Net.

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Natural History Museum at the Oslo Science Fair

The Natural History Museum in Oslo and NorBOL participated at the Oslo Science Fair September 23-24, 2016. At our stand we communicated challenges with biological, morphological and genetic species definitions. Fifteen hundered shots of juice were served with the task of identifying which three fruits the juice was composed of. To help them with the task, people received visual DNA barcodes of the fruits as well as a reference library of fruit barcodes. Many learned how DNA barcoding can be used to determine the content of food.

Gunnhild med juicenGunnhild Marthinsen serves unknown juice at the Oslo Science Fair. Photo Dag Inge Danielsen CC-BY.

juice-testingPhD-student Sonja Kistenich shows how DNA barcoding works. Photo Gunnhild Marthinsen CC-BY.

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NorBOL at Researchers’ Night 2016

On Friday September 23 time had come for Researchers’ Night in the NTNU Science Building. Like previous years, the interest for participation was great and more than 1100 high school students trawled the stands, attended lectures and visited labs at NTNU. NorBOL was present with a stand on DNA barcoding and LifeScanner.

NorBOL at RNXiaolong and Aina welcome visitiors to NorBOL’s stand at Researchers’ Night 2016. Photo Torbjørn Ekrem CC-BY.

At our stand, students and teachers were challanged to do practical DNA barcoding: Three visualized DNA sequences from unknown prey had been retrieved from a boreal owl pellet and could be compared to known sequences in a reference library. The task was not necessarily simple and created good discussions among the participants. As prize and proof of particpation, the stydents received #mydnabarcode stickers.

Referansebibliotek RNTorbjørn explains how DNA barcoding works. Photo Xiaolong Lin CC-BY.

Active visitors at the NorBOL stand. Video Torbjørn Ekrem CC-BY.

Thanks to Aina, Erik and Xiaolong for excellent contributions to the NorBOL stand and Researcher’s Night!

Torbjørn